1. Alm, R.A., L.-S. L. Ling, D. T. Moir, B. L. King, E. D. Brown, P. C. Doig, D. R. Smith, B. Noonan, B. C. Guild, B. L. deJonge et al. 1999 Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori Nature 397:176-180
|
2. Andersson, S. G. E. y C. G. Kurland. 1998. Reductive evolution of resident genomes. Trends Microbiol. 6: 263-268.
|
3. Angert, E.R. y R. M. Losick. 1998. Propagation by sporulation in the guinea pig symbiont Metabacterium polyspora. Proc. Natl. Acad. Sci. (U S A) 95:10218-10223.
|
4. Bendich, A. J. y K. Drlica. 2000. Prokaryotic and eukaryotic chromosomes: what's the difference? BioEssays 22: 481-486.
|
5. Berthorsson, U. y H. Ochman. 1995. Heterogeneity of genome sizes among natural isolates of Escherichia coli. J. Bacteriol. 177: 5784-5789.
|
6. Bresler, V., W. L. Montgomery, L. Fishelson, y P. E. Pollak. 1998. Gigantism in a bacterium, Epulopiscium fishelsoni, correlates with complex patterns in arrangement, quantity, and segregation of DNA. J. Bacteriol. 180: 5601-5611.
|
7. Caballero-Mellado, J., L. López-Reyes y R. Bustillos-Cristales. 1999. Presence of 16S rRNA in multiple replicons in Azospirillum brasilense. FEMS Microbiol. Lett. 178: 283-288.
|
8. Casjens, S. 1998. The diverse and dynamic structure of bacterial genomes. Annu. Rev. Genet. 32: 339-377.
|
9. Casjens S., N. Palmer, R. van Vugt, W. M. Huang, B. Stevenson, P. Rosa, R. Lathigra, G. Sutton, J. Peterson, R. J. Dodson, D. Haft, E. Hickey, M. Gwinn, O. White y C. M. Fraser. 2000. A bacterial genome in flux: the twelve linear and nine circular extrachromosomal DNAs in an infectious isolate of the Lyme disease spirochete Borrelia burgdorferi. Mol. Microbiol. 35: 490-516.
|
10. Chen, C. W. 1996. Complications and implications of linear bacterial chromosomes. Trends Genet. 12: 192-196.
|
11. Coissac, E., E. Maillier y P. Netter. 1997 A comparative study of duplications in bacteria and eukaryotes: the importance of telomeres. Mol. Biol. Evol. 14: 1062-1074.
|
12. Cole, S. T. e I. Saint-Girons. 1999. Bacterial genomes-all shapes and sizes, pp.35-62. En: R. L. Charlebois (ed.), Organization of the prokaryotic genome. American Society for Microbiology, Washington, E.E.U.U.
|
13. Dykhuizen, D. E. 1998. Santa Rosalia revisited: why are there so many species of bacteria? Antonie van Leeuwenhoek 73: 25-33.
|
14. Fonstein, M. y R. Haselkorn. 1995. Physical mapping of bacterial genomes. J. Bacteriol. 177: 3361-3369.
|
15. Fraser, C. M., J. A. Eisen y S. L. Salzberg. 2000. Microbial genome sequencing. Nature 406: 799-803.
|
16. García-de los Santos, A., S. Brom y D. Romero. 1996. Rhizobium plasmids in bacteria-legume interactions. World J. Microbiol. & Biotechnol. 12: 119-125.
|
17. Hacker, J., G. Blum-Oehler, I. Mühldorfer y H. Tschäpe. 1997. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol. Microbiol. 23: 1089-1097.
|
18. Hall, R. M. y C. M. Collis. 1995. Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination. Mol. Microbiol. 15: 593-600.
|
19. Heidelberg, J. F., J. A. Eisen, W. C. Nelson, R. A. Clayton, M. L. Gwinn, R. J. Dodson, D. H. Haft, E. K. Hickey, J. D. Peterson, L. Umayam, et al. 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406:477-484.
|
20. Himmelreich, R., H. Plagens, H. Hilbert, B. Reiner y R. Herrmann. 1997 Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium, Nucleic Acids Res. 25: 701-712.
|
21. Hochhut, B. y M. K. Waldor. 1999. Site-specific integration of the conjugal Vibrio cholerae SXT element into prfC. Mol. Microbiol. 32: 99-110.
|
22. Holloway, B. W. 1993. Genetics for all bacteria. Annu. Rev. Microbiol. 47: 659-684.
|
23. Itaya, M. y T. Tanaka. 1997. Experimental surgery to create subgenomes of Bacillus subtilis 168. Proc. Natl. Acad. Sci. (USA) 94: 5378-5382.
|
24. Itaya, M. y T. Tanaka. 1999. Fate of unstable Bacillus subtilis subgenome: re-integration and amplification in the main genome. FEBS Lett. 448: 235-238.
|
25. Jumas-Bilak, E., S. Michaux-Charachon, G. Bourg, M. Ramuz y A. Allardet-Servent. 1998. Unconventional genomic organization in the alpha subgroup of the Proteobacteria. J. Bacteriol. 180: 2749-2755.
|
26. Kalman, S., W. Mitchell, R. Marathe, C. Lammel, J. Fan R. W. Hyman, L. Olinger, J. Grimwood, R. W. Davis y R. S. Stephens. 1999. Comparative genomes of Chlamydia pneumoniae and C. trachomatis. Nat. Genet. 21: 385-389.
|
27. Kurland, C. G. 2000. Something for everyone: horizontal gene transfer in evolution. EMBO Rep. 1: 92-95.
|
28. Lan, R. y P. R. Reeves. 2000. Intraspecies variation in bacterial genomes: the need for a species genome concept. Trends Microbiol. 8: 396-401.
|
29. Levin-Zaidman, S., D. Frenkiel-Krispin, E. Shimoni, I. Sabanay, S. G. Wolf y A. Minsky. 2000. Ordered intracellular RecA-DNA assemblies: a potential site of in vivo RecA-mediated activities. Proc. Natl. Acad. Sci. (USA) 97: 6791-6796.
|
30. Lin, Y.S. y C. W. Chen. 1997. Instability of artificially circularized chromosomes of Streptomyces lividans. Mol. Microbiol. 26: 709-719.
|
31. Lindsay, J. A., a. Ruzin, H. F. Ross, N. Kurepina y R. P. Novick. 1998. The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus. Mol. Microbiol. 18: 201-208.
|
32. Liu, S.L. y K. E. Sanderson. 1995. Rearrangements in the genome of the bacterium Salmonella typhi. Proc. Natl. Acad. Sci. (USA) 92: 1018-1022.
|
33. Maeder, D. L., R. B. Weiss, D. M. Dunn, J. L. Cherry, J. M. González, J. DiRuggiero y F. T. Robb. 2000. Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences. Genetics 152: 1299-1305.
|
34. Martin-Didonet, C. C., L. S Chubatsu, E. M. Souza, M. Kleina, F. G. Rego, L. U. Rigo, M. G. Yates y F. O. Pedrosa. 2000. Genome structure of the genus Azospirillum. J. Bacteriol. 182: 4113-4116.
|
35. Mazel, D., B. Dychinco, V. A. Webb y J. A. Davies. 1998. A distinctive class of integron in the Vibrio cholerae genome. Science 280: 605-608.
|
36. Merlin, C., J. Mahillon, J. Nesvera y A. Toussaint. 2000. Gene recruiters and transporters: the modular structure of bacterial mobile elements, pp. 363-409. En: C. M. Thomas (ed.), The horizontal gene pool: bacterial plasmids and gene spread. Holanda, Harwood Academic Publishers.
|
37. Moreno, E. 1998. Genome evolution within the alpha Proteobacteria: why do some bacteria not possess plasmids and others exhibit more than one different chromosome? FEMS Microbiol. Rev. 22: 255-275.
|
38. Ng, W.V., S. A. Ciufo, T. M. Smith, R. E. Bumgarner, D. Baskin, J. Faust, B. Hall, C. Loretz, J. Seto, J. Slagel, L. Hood y S. DasSarma. 1998. Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome? Genome Res. 8: 1131-1141.
|
39. Ng, W. P., S. P. Kennedy , G. G. Mahairas, B. Berquist, M. Pan, H. D. Shukla, S. R. Lasky, N. S. Baliga, V. Thorsson, J. Sbrogna, et al. 2000. Genome sequence of Halobacterium species NRC-1. Proc. Natl. Acad. Sci. (USA) 97: 12176-12181.
|
40. Ochman, H., J. G. Lawrence y E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
|
41. Papadopoulos, D., D. Schneider, J. Meier-Eiss, W. Arber, R. E. Lenski y M. Blot. 1999. Genomic evolution during a 10 000-generation experiment with bacteria. Proc. Natl. Acad. Sci. (USA) 96: 3807-3812.
|
42. Pappenheimer Jr., A. M. y J. R. Murphy. 1983. Studies on the molecular epidemiology of diphtheria. Lancet 1983 Oct 22;2(8356):923-926.
|
43. Rocha, E. P. C., A. Danchin y A. Viari. 1999. Analysis of long repeats in bacterial genomes reveals alternative evolutionary mechanisms in Bacillus subtilis and other competent prokaryotes. Mol. Biol. Evol. 16: 1219-1230.
|
44. Romero, D., J. Martínez-Salazar, E. Ortiz, C. Rodríguez y E. Valencia-Morales. 1999. Repeated sequences in bacterial chromosomes and plasmids: a glimpse from sequenced genomes. Res. Microbiol. 150: 735-743.
|
45. Romero, D., y R. Palacios. 1997. Gene amplification and genomic plasticity in prokaryotes. Ann. Rev. Genet. 31: 91-111.
|
46. Römling, U., K. Schmidt y B. Tümmler. 1997. One-dimensional pulsed-field gel electrophoresis, pp.312-325. En: F.J. de Bruijn, J. R. Lupski y G. M. Weinstock (eds.), Bacterial genomes: physical structure and analysis. Chapman and Hall, New York, E.E.U.U.
|
47. Roth, J.R., N. Benson T. Galitski, K. Haack J. G. Lawrence y L. Miesel. 1996. Rearrangements of the bacterial chromosome: formation and applications, pp. 2256 -2276. En: F. C. Neidhardt, R. Curtiss III, J. L. Ingraham, E. C. C. Lin, E.C.C., K. Low Jr., et al., (Eds.), Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. American Society for Microbiology, E.E.U.U.
|
48. Rowe-Magnus, D. A., A.-M. Guérout y D. Mazel. 1999. Super-integrons. Res. Microbiol. 150: 641-651
|
49. Rybchin, V. N. y A. N. Svarchevsky. 1999. The plasmid prophage N15: a linear DNA with covalently closed ends. Mol. Microbiol. 33: 895-903.
|
50. Schmidt, H., M. Bielaszewska y H. Karch. 1999. Transduction of enteric Escherichia coli isolates with a derivative of Shiga toxin 2-encoding bacteriophage phi3538 isolated from Escherichia coli O157:H7. Appl. Environ. Microbiol. 65: 3855-3861.
|
51. Schneider, D., E. Duperchy, E. Coursange, R. E. Lenski y M. Blot. 2000. Long-term experimental evolution in Escherichia coli. IX. Characterization of insertion sequence-mediated mutations and rearrangements. Genetics 156: 477-488
|
52. Shimkets, L. J. 1997. Structure and sizes of genomes of the archaea and bacteria, pp. 5-11. En: F.J. de Bruijn, J. R. Lupski y G. M. Weinstock (eds.), Bacterial genomes: physical structure and analysis. Chapman and Hall, New York, E.E.U.U.
|
53. Sullivan, J. T. y C. W. Ronson. 1998. Evolution of rhizobia by acquisition of a 500 kb symbiosis island that integrates into a phe-tRNA gene. Proc. Natl. Acad. Sci. (USA) 95: 5145-5149.
|
54. Tillier, E. R. M. y R. A. Collins. 2000. Genome rearrangement by replication-directed translocation. Nature Genet. 26: 195-197.
|
55. Top, E. M., Y. Moëne-Loccoz, T. Pembroke y C. M. Thomas. 2000. Phenotypic traits conferred by plasmids, pp. 249-285. En: C. M. Thomas (ed.), The horizontal gene pool: bacterial plasmids and gene spread. Holanda, Harwood Academic Publishers.
|
56. Waldor M. K. y J. J. Mekalanos. 1996. Lysogenic conversion by a filamentous phage encoding cholera toxin. Science 272: 1910-1914.
|
57. White, O., J. A. Eisen, J. F. Heidelberg, E. K. Hickey, J. D. Peterson, R. J. Dodson, D. H. Haft , M. L. Gwinn, W. C. Nelson, D. L. Richardson, K. S., et al. 1999. Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1. Science 286: 1571-1577.
|
58. Woldringh, C. L. y R. van Driel. 1999. The eukaryotic perspective: similarities and distinctions between pro- and eukaryotes, pp. 77-90. En: R. L. Charlebois (ed.), Organization of the prokaryotic genome. American Society for Microbiology, Washington, E.E.U.U.
|
59. Woldringh, C. L. y T. Odijk. 1999. Structure of DNA within the bacterial cell: physics and physiology, pp. 171-187. En: R. L. Charlebois (ed.), Organization of the prokaryotic genome. American Society for Microbiology, Washington, E.E.U.U.
|
|